Lab assignments

I’ve split the labs into two parts: introduction and a study.

Motivation, setup, basic examples

  1. Lab 1: Setup and test computing environment, improve example terminology

  2. Lab 2: Phenotype/concept normalization example I - Defining phenotypes in ICD-10

  3. Lab 3: Phenotype/concept normalization example II - Using SNOMED-CT to define phenotypes in ICD-10

  4. Lab 4: Phenotype/concept normalization example III - Using RxNorm and LOINC for drugs and measurements

An observational study: application of symbolic methods

  1. Lab 5: Hypothesis, variables, comparisons

  2. Lab 6: Confounding variables

  3. Lab 7: Definitions for OMOP data

  4. Lab 8: Refine definitions based on feedback

  5. Lab 9: Plausible biological mechanisms

  6. Lab 10: TBD

Lab assignments - Michael Zietz